www.coria-cfd.fr - User contributions [en]

YALES2

2025-02-17T09:20:30Z

Mendez: /* YALES2 Library and solvers */

{{#customtitle:YALES2 public page|YALES2 public page - www.coria-cfd.fr}}

<div class="infobox floatright" style="width: 320px;">
[[File:PRECCINSTA_2634M_q_crit_persp_small.png|right|thumb|300px|'''PRECCINSTA burner with [[YALES2 Gallery|YALES2]]''']]

</div>

== Motivation ==

YALES2 aims at the solving of two-phase combustion from primary atomization to pollutant prediction on massive complex meshes. It is able to handle efficiently unstructured meshes with several billions of elements, thus enabling the Direct Numerical Simulation of laboratory and semi-industrial configurations.

YALES2 was developed from 2007 to 2010 by [[User:Moureauv|V. Moureau]] and is maintained since 2011 by [[User:Moureauv|V. Moureau]] and [[User:Lartigue|G. Lartigue]], joined later by P. Bénard and [[User:Bioche|K. Bioche]] at CORIA and several other [[User|people]] in research laboratories.

More information may be found in the following presentation: [[media:yales2_course.pdf | YALES2 presentation]]

== Community ==

YALES2 is developed by a large community with more than 500 researchers/engineers who were trained by the CORIA laboratory since 2009. The community regroups academic partners, HPC centers, industrial partners, HPC experts, SMEs and more. The code is also used for CFD training in academic courses at INSA of Rouen in the Energy and Propulsion department.

[[File:Network.jpg | center | thumb | 700px | YALES2 network]]

== Commitments ==

The YALES2 team is committed to supporting code users through training, meetings, projects or events.

[[File:Commitment.jpg | center | thumb | 700px | YALES2 team commitment]]

Here an example of event you can participate to:

[[File:Extreme CFD.jpg | center | thumb | 700px | Extreme CFD event, https://ecfd.coria-cfd.fr/index.php/Ecfd:ecfd_4th_edition]]

== YALES2 Library and solvers ==

The numerical library YALES2LIB consists of all the numerical methods required to develop solvers:

[[File:Library.jpg | center | thumb | 800px | YALES2 library]]

We have plenty of solvers today, here are the main ones:

[[File:Solvers.jpg | center | thumb | 700px | YALES2 solvers]]

== Agile development ==
The fast development of the YALES2 platform comes mainly from the agile development project management methodology. It relies on a number of tools:
* programming: modular structure of the code with more than 200 objects and 420 modules
* non-regression and testing: private gitlab forge, nightly pipelines with more than 300 automatic jobs
* fast compiling: automatic dependencies, two pass compiling, 1m15s to compile 850'000 lines of fortran
* easy debugging: 2 compilation modes (optim, debug), many helpers (memory consumption, number of arrays, ...)

A few figures:
* 16 major releases since 2007
* 850 000 object-oriented Fortran 2008 lines for YALES2_2023.04
* 15 600+ commits
* 200+ active branches
* 1000+ merge requests
* 600+ members on the gitlab projects
* 100+ contributors

== Gallery ==
Some computation examples are given in the [[YALES2_Gallery|gallery]] and on the Youtube video channel [https://www.youtube.com/@CoriaCFD]

YALES2BIO

2013-02-12T08:35:11Z

Mendez:

{{#customtitle:YALES2BIO public page|YALES2BIO public page - www.coria-cfd.fr}}
== Motivation ==

YALES2BIO aims at solving the equations of fluid dynamics in the context of biological flows. The main application is cardiovoscular flows, involving microscale (at the level of cells) and macro-scale applications (blood flow in the heart).

YALES2BIO was developed from 2010 to 2013 by [[User:Mendez|S. Mendez]] and [[User:Chnafa|C. Chnafa]] and is maintained since 2012 by [[User:Mendez|S. Mendez]] at I3M, together with the YALES2 developers at CORIA.

== Solvers ==

YALES2BIO is based on [[YALES2|YALES2]]. In addition to the solvers implemented in YALES2, YALES2BIO has several specific solvers.
* Red blood cell solver ('''RBC''')
* Electrostatics solver ('''ESS''')
* ALE solver, with specific routines for heart ('''ALE''')

All the following features are inherited from the YALES2 kernel:

== Models ==
* Turbulence (Large-Eddy Simulation)
** Constant Smagorinsky
** Localized dynamic Smagorinsky
** WALE
** SIGMA

== Numerics ==
* Spatial: 2nd- and 4th-order finite-volume schemes
* Temporal:
** 4th-order explicit time integration (RK4 and TFV4A) of convective terms
** explicit and implicit diffusion and source terms
* Stabilization: Cook & Cabot 4th-order artificial viscosity
* Linear solvers:
** PCG
** BICGSTAB, BICGSTAB2, BICGSTAB(2)
** Deflated PCG
** Deflated BICGSTAB(2)
** Residual recycling

== Data Structures ==
* 1D, 2D, 3D unstructured solver
* Full dual decomposition based on METIS
* Data registration (int, real, char, node, elem, face, pair, scalar, vector, tensor)
* Optimized non-blocking MPI communications
* Parallel load balancing
* Automatic reconnection of periodic boundaries
* Automatic homogeneous mesh refinement
* IO formats: Gambit (Fluent), Ensight, prepartionned HDF5 (XDMF) with compression
* Cartesian mesh generator
* Partitioned mesh support for HDF5 independent of the number of processors
* Parallel interpolator for partitioned HDF5 meshes
* Automatic sponge layers
* Built-in Gaussian filters of arbitrary size

== Software engineering ==
* 185,000 lines of code
* Object-oriented fortran with modules (f90)
* Version management with GIT
* Inline documentation in the source code (XML + Latex)
* GUI with client/server mode (wxwidgets, C++)
* Automatic validation tests (AQAT, AVVT)
* Automatic dependency of f90 modules in makefiles
* Keyword-based input file
* Easy profiling with timers

== Gallery ==
Some computation examples are given in the [[YALES2_Gallery|gallery]] (Simulation of a cardiac cycle).

YALES2BIO

2013-02-12T08:34:20Z

Mendez:

{{#customtitle:YALES2BIO public page|YALES2BIO public page - www.coria-cfd.fr}}
== Motivation ==

YALES2BIO aims at solving the equations of fluid dynamics in the context of biological flows. The main application is cardiovoscular flows, involving microscale (at the level of cells) and macro-scale applications (blood flow in the heart).

YALES2BIO was developed from 2010 to 2013 by [[User:Mendez|S. Mendez]] and [[User:Chnafa|C. Chnafa]] and is maintained since 2012 by [[User:Mendez|S. Mendez]] at I3M, together with the YALES2 developers at CORIA.

== Solvers ==

YALES2BIO is based on [[yales2|YALES]]. In addition to the solvers implemented in YALES2, YALES2BIO has several specific solvers.
* Red blood cell solver ('''RBC''')
* Electrostatics solver ('''ESS''')
* ALE solver, with specific routines for heart ('''ALE''')

All the following features are inherited from the YALES2 kernel:

== Models ==
* Turbulence (Large-Eddy Simulation)
** Constant Smagorinsky
** Localized dynamic Smagorinsky
** WALE
** SIGMA

== Numerics ==
* Spatial: 2nd- and 4th-order finite-volume schemes
* Temporal:
** 4th-order explicit time integration (RK4 and TFV4A) of convective terms
** explicit and implicit diffusion and source terms
* Stabilization: Cook & Cabot 4th-order artificial viscosity
* Linear solvers:
** PCG
** BICGSTAB, BICGSTAB2, BICGSTAB(2)
** Deflated PCG
** Deflated BICGSTAB(2)
** Residual recycling

== Data Structures ==
* 1D, 2D, 3D unstructured solver
* Full dual decomposition based on METIS
* Data registration (int, real, char, node, elem, face, pair, scalar, vector, tensor)
* Optimized non-blocking MPI communications
* Parallel load balancing
* Automatic reconnection of periodic boundaries
* Automatic homogeneous mesh refinement
* IO formats: Gambit (Fluent), Ensight, prepartionned HDF5 (XDMF) with compression
* Cartesian mesh generator
* Partitioned mesh support for HDF5 independent of the number of processors
* Parallel interpolator for partitioned HDF5 meshes
* Automatic sponge layers
* Built-in Gaussian filters of arbitrary size

== Software engineering ==
* 185,000 lines of code
* Object-oriented fortran with modules (f90)
* Version management with GIT
* Inline documentation in the source code (XML + Latex)
* GUI with client/server mode (wxwidgets, C++)
* Automatic validation tests (AQAT, AVVT)
* Automatic dependency of f90 modules in makefiles
* Keyword-based input file
* Easy profiling with timers

== Gallery ==
Some computation examples are given in the [[YALES2_Gallery|gallery]] (Simulation of a cardiac cycle).

YALES2BIO

2013-02-12T08:33:04Z

Mendez: /* Gallery */

{{#customtitle:YALES2BIO public page|YALES2BIO public page - www.coria-cfd.fr}}
== Motivation ==

YALES2BIO aims at solving the equations of fluid dynamics in the context of biological flows. The main application is cardiovoscular flows, involving microscale (at the level of cells) and macro-scale applications (blood flow in the heart).

YALES2BIO was developed from 2010 to 2013 by [[User:Mendez|S. Mendez]] and [[User:Chnafa|C. Chnafa]] and is maintained since 2012 by [[User:Mendez|S. Mendez]] at I3M, together with the YALES2 developers at CORIA.

== Solvers ==

YALES2BIO is based on YALES2. In addition to the solvers implemented in YALES2, YALES2BIO has several specific solvers.
* Red blood cell solver ('''RBC''')
* Electrostatics solver ('''ESS''')
* ALE solver, with specific routines for heart ('''ALE''')

All the following features are inherited from the YALES2 kernel:

== Models ==
* Turbulence (Large-Eddy Simulation)
** Constant Smagorinsky
** Localized dynamic Smagorinsky
** WALE
** SIGMA

== Numerics ==
* Spatial: 2nd- and 4th-order finite-volume schemes
* Temporal:
** 4th-order explicit time integration (RK4 and TFV4A) of convective terms
** explicit and implicit diffusion and source terms
* Stabilization: Cook & Cabot 4th-order artificial viscosity
* Linear solvers:
** PCG
** BICGSTAB, BICGSTAB2, BICGSTAB(2)
** Deflated PCG
** Deflated BICGSTAB(2)
** Residual recycling

== Data Structures ==
* 1D, 2D, 3D unstructured solver
* Full dual decomposition based on METIS
* Data registration (int, real, char, node, elem, face, pair, scalar, vector, tensor)
* Optimized non-blocking MPI communications
* Parallel load balancing
* Automatic reconnection of periodic boundaries
* Automatic homogeneous mesh refinement
* IO formats: Gambit (Fluent), Ensight, prepartionned HDF5 (XDMF) with compression
* Cartesian mesh generator
* Partitioned mesh support for HDF5 independent of the number of processors
* Parallel interpolator for partitioned HDF5 meshes
* Automatic sponge layers
* Built-in Gaussian filters of arbitrary size

== Software engineering ==
* 185,000 lines of code
* Object-oriented fortran with modules (f90)
* Version management with GIT
* Inline documentation in the source code (XML + Latex)
* GUI with client/server mode (wxwidgets, C++)
* Automatic validation tests (AQAT, AVVT)
* Automatic dependency of f90 modules in makefiles
* Keyword-based input file
* Easy profiling with timers

== Gallery ==
Some computation examples are given in the [[YALES2_Gallery|gallery]] (Simulation of a cardiac cycle).

YALES2BIO

2013-02-12T08:31:30Z

Mendez: /* Motivation */

{{#customtitle:YALES2BIO public page|YALES2BIO public page - www.coria-cfd.fr}}
== Motivation ==

YALES2BIO aims at solving the equations of fluid dynamics in the context of biological flows. The main application is cardiovoscular flows, involving microscale (at the level of cells) and macro-scale applications (blood flow in the heart).

YALES2BIO was developed from 2010 to 2013 by [[User:Mendez|S. Mendez]] and [[User:Chnafa|C. Chnafa]] and is maintained since 2012 by [[User:Mendez|S. Mendez]] at I3M, together with the YALES2 developers at CORIA.

== Solvers ==

YALES2BIO is based on YALES2. In addition to the solvers implemented in YALES2, YALES2BIO has several specific solvers.
* Red blood cell solver ('''RBC''')
* Electrostatics solver ('''ESS''')
* ALE solver, with specific routines for heart ('''ALE''')

All the following features are inherited from the YALES2 kernel:

== Models ==
* Turbulence (Large-Eddy Simulation)
** Constant Smagorinsky
** Localized dynamic Smagorinsky
** WALE
** SIGMA

== Numerics ==
* Spatial: 2nd- and 4th-order finite-volume schemes
* Temporal:
** 4th-order explicit time integration (RK4 and TFV4A) of convective terms
** explicit and implicit diffusion and source terms
* Stabilization: Cook & Cabot 4th-order artificial viscosity
* Linear solvers:
** PCG
** BICGSTAB, BICGSTAB2, BICGSTAB(2)
** Deflated PCG
** Deflated BICGSTAB(2)
** Residual recycling

== Data Structures ==
* 1D, 2D, 3D unstructured solver
* Full dual decomposition based on METIS
* Data registration (int, real, char, node, elem, face, pair, scalar, vector, tensor)
* Optimized non-blocking MPI communications
* Parallel load balancing
* Automatic reconnection of periodic boundaries
* Automatic homogeneous mesh refinement
* IO formats: Gambit (Fluent), Ensight, prepartionned HDF5 (XDMF) with compression
* Cartesian mesh generator
* Partitioned mesh support for HDF5 independent of the number of processors
* Parallel interpolator for partitioned HDF5 meshes
* Automatic sponge layers
* Built-in Gaussian filters of arbitrary size

== Software engineering ==
* 185,000 lines of code
* Object-oriented fortran with modules (f90)
* Version management with GIT
* Inline documentation in the source code (XML + Latex)
* GUI with client/server mode (wxwidgets, C++)
* Automatic validation tests (AQAT, AVVT)
* Automatic dependency of f90 modules in makefiles
* Keyword-based input file
* Easy profiling with timers

== Gallery ==
Some computation examples are given in the [[YALES2_Gallery|gallery]].

YALES2BIO

2013-02-12T08:31:14Z

Mendez: /* Motivation */

{{#customtitle:YALES2BIO public page|YALES2BIO public page - www.coria-cfd.fr}}
== Motivation ==

YALES2BIO aims at the solving of the equations of fluid dynamics in the context of biological flows. The main application is cardiovoscular flows, involving microscale (at the level of cells) and macro-scale applications (blood flow in the heart).

YALES2BIO was developed from 2010 to 2013 by [[User:Mendez|S. Mendez]] and [[User:Chnafa|C. Chnafa]] and is maintained since 2012 by [[User:Mendez|S. Mendez]] at I3M, together with the YALES2 developers at CORIA.

== Solvers ==

YALES2BIO is based on YALES2. In addition to the solvers implemented in YALES2, YALES2BIO has several specific solvers.
* Red blood cell solver ('''RBC''')
* Electrostatics solver ('''ESS''')
* ALE solver, with specific routines for heart ('''ALE''')

All the following features are inherited from the YALES2 kernel:

== Models ==
* Turbulence (Large-Eddy Simulation)
** Constant Smagorinsky
** Localized dynamic Smagorinsky
** WALE
** SIGMA

== Numerics ==
* Spatial: 2nd- and 4th-order finite-volume schemes
* Temporal:
** 4th-order explicit time integration (RK4 and TFV4A) of convective terms
** explicit and implicit diffusion and source terms
* Stabilization: Cook & Cabot 4th-order artificial viscosity
* Linear solvers:
** PCG
** BICGSTAB, BICGSTAB2, BICGSTAB(2)
** Deflated PCG
** Deflated BICGSTAB(2)
** Residual recycling

== Data Structures ==
* 1D, 2D, 3D unstructured solver
* Full dual decomposition based on METIS
* Data registration (int, real, char, node, elem, face, pair, scalar, vector, tensor)
* Optimized non-blocking MPI communications
* Parallel load balancing
* Automatic reconnection of periodic boundaries
* Automatic homogeneous mesh refinement
* IO formats: Gambit (Fluent), Ensight, prepartionned HDF5 (XDMF) with compression
* Cartesian mesh generator
* Partitioned mesh support for HDF5 independent of the number of processors
* Parallel interpolator for partitioned HDF5 meshes
* Automatic sponge layers
* Built-in Gaussian filters of arbitrary size

== Software engineering ==
* 185,000 lines of code
* Object-oriented fortran with modules (f90)
* Version management with GIT
* Inline documentation in the source code (XML + Latex)
* GUI with client/server mode (wxwidgets, C++)
* Automatic validation tests (AQAT, AVVT)
* Automatic dependency of f90 modules in makefiles
* Keyword-based input file
* Easy profiling with timers

== Gallery ==
Some computation examples are given in the [[YALES2_Gallery|gallery]].

YALES2BIO

2013-02-12T08:31:03Z

Mendez:

{{#customtitle:YALES2BIO public page|YALES2BIO public page - www.coria-cfd.fr}}
== Motivation ==

YALES2BIO aims at the solving of the equations of fluid dynamics in the context of biological flows. The main application is cardiovoscular flows, involving microscale (at the level of cells) and macro-scale applications (blood flow in the heart).

YALES2BIO was developed from 2010 to 2013 by [[User:Mendez|S. Mendez]] and [[User:Chnafa|C. Chnafa]] and is maintained since 2012 by [[User:Mendez|S. Mendez]] at I3M, together with the YALES2 devbelopers at CORIA.

== Solvers ==

YALES2BIO is based on YALES2. In addition to the solvers implemented in YALES2, YALES2BIO has several specific solvers.
* Red blood cell solver ('''RBC''')
* Electrostatics solver ('''ESS''')
* ALE solver, with specific routines for heart ('''ALE''')

All the following features are inherited from the YALES2 kernel:

== Models ==
* Turbulence (Large-Eddy Simulation)
** Constant Smagorinsky
** Localized dynamic Smagorinsky
** WALE
** SIGMA

== Numerics ==
* Spatial: 2nd- and 4th-order finite-volume schemes
* Temporal:
** 4th-order explicit time integration (RK4 and TFV4A) of convective terms
** explicit and implicit diffusion and source terms
* Stabilization: Cook & Cabot 4th-order artificial viscosity
* Linear solvers:
** PCG
** BICGSTAB, BICGSTAB2, BICGSTAB(2)
** Deflated PCG
** Deflated BICGSTAB(2)
** Residual recycling

== Data Structures ==
* 1D, 2D, 3D unstructured solver
* Full dual decomposition based on METIS
* Data registration (int, real, char, node, elem, face, pair, scalar, vector, tensor)
* Optimized non-blocking MPI communications
* Parallel load balancing
* Automatic reconnection of periodic boundaries
* Automatic homogeneous mesh refinement
* IO formats: Gambit (Fluent), Ensight, prepartionned HDF5 (XDMF) with compression
* Cartesian mesh generator
* Partitioned mesh support for HDF5 independent of the number of processors
* Parallel interpolator for partitioned HDF5 meshes
* Automatic sponge layers
* Built-in Gaussian filters of arbitrary size

== Software engineering ==
* 185,000 lines of code
* Object-oriented fortran with modules (f90)
* Version management with GIT
* Inline documentation in the source code (XML + Latex)
* GUI with client/server mode (wxwidgets, C++)
* Automatic validation tests (AQAT, AVVT)
* Automatic dependency of f90 modules in makefiles
* Keyword-based input file
* Easy profiling with timers

== Gallery ==
Some computation examples are given in the [[YALES2_Gallery|gallery]].

YALES2BIO

2013-02-12T08:30:23Z

Mendez: /* Gallery */

{{#customtitle:YALES2BIO public page|YALES2BIO public page - www.coria-cfd.fr}}
== Motivation ==

YALES2BIO aims at the solving of the equations of fluid dynamics in the context of biological flows. The main application is cardiovoscular flows, involving microscale (at the level of cells) and macro-scale applications (blood flow in the heart).

YALES2BIO was developed from 2010 to 2013 by [[User:Mendez|S. Mendez]] and [[User:Chnafa|C. Chnafa]] and is maintained since 2012 by [[User:Mendez|S. Mendez]] at I3M, together with the YALES2 devbelopers at CORIA.

== Solvers ==

YALES2BIO is based on YALES2. In addition to the solvers implemented in YALES2, YALES2BIO has several specific solvers.
* Red blood cell solver ('''RBC''')
* Electrostatics solver ('''ESS''')
* ALE solver, with specific routines for heart ('''ALE''')

All the following features are inherited from the YALES2 kernel:

== Models ==
* Turbulence (Large-Eddy Simulation)
** Constant Smagorinsky
** Localized dynamic Smagorinsky
** WALE
** SIGMA

== Numerics ==
* Spatial: 2nd- and 4th-order finite-volume schemes
* Temporal:
** 4th-order explicit time integration (RK4 and TFV4A) of convective terms
** explicit and implicit diffusion and source terms
* Stabilization: Cook & Cabot 4th-order artificial viscosity
* Linear solvers:
** PCG
** BICGSTAB, BICGSTAB2, BICGSTAB(2)
** Deflated PCG
** Deflated BICGSTAB(2)
** Residual recycling

== Data Structures ==
* 1D, 2D, 3D unstructured solver
* Full dual decomposition based on METIS
* Data registration (int, real, char, node, elem, face, pair, scalar, vector, tensor)
* Optimized non-blocking MPI communications
* Parallel load balancing
* Automatic reconnection of periodic boundaries
* Automatic homogeneous mesh refinement
* IO formats: Gambit (Fluent), Ensight, prepartionned HDF5 (XDMF) with compression
* Cartesian mesh generator
* Partitioned mesh support for HDF5 independent of the number of processors
* Parallel interpolator for partitioned HDF5 meshes
* Automatic sponge layers
* Built-in Gaussian filters of arbitrary size

== Software engineering ==
* 185,000 lines of code
* Object-oriented fortran with modules (f90)
* Version management with GIT
* Inline documentation in the source code (XML + Latex)
* GUI with client/server mode (wxwidgets, C++)
* Automatic validation tests (AQAT, AVVT)
* Automatic dependency of f90 modules in makefiles
* Keyword-based input file
* Easy profiling with timers

== Gallery ==
Some computation examples are given in the [[YALES2_Gallery|gallery]].

== Performances ==
Thanks to highly efficient linear solvers, the speed-up of YALES2 is almost linear for meshes with several billion elements. These measures up to 21 billion elements were performed at IDRIS in France and at the Juelich Supercomputing Center in Germany.

[[File:YALES2 2010 Scale up.png|left|thumb|600px|YALES2 scale-up on Blue Gene/P machines]]

YALES2BIO

2013-02-12T08:29:44Z

Mendez:

{{#customtitle:YALES2BIO public page|YALES2BIO public page - www.coria-cfd.fr}}
== Motivation ==

YALES2BIO aims at the solving of the equations of fluid dynamics in the context of biological flows. The main application is cardiovoscular flows, involving microscale (at the level of cells) and macro-scale applications (blood flow in the heart).

YALES2BIO was developed from 2010 to 2013 by [[User:Mendez|S. Mendez]] and [[User:Chnafa|C. Chnafa]] and is maintained since 2012 by [[User:Mendez|S. Mendez]] at I3M, together with the YALES2 devbelopers at CORIA.

== Solvers ==

YALES2BIO is based on YALES2. In addition to the solvers implemented in YALES2, YALES2BIO has several specific solvers.
* Red blood cell solver ('''RBC''')
* Electrostatics solver ('''ESS''')
* ALE solver, with specific routines for heart ('''ALE''')

All the following features are inherited from the YALES2 kernel:

== Models ==
* Turbulence (Large-Eddy Simulation)
** Constant Smagorinsky
** Localized dynamic Smagorinsky
** WALE
** SIGMA

== Numerics ==
* Spatial: 2nd- and 4th-order finite-volume schemes
* Temporal:
** 4th-order explicit time integration (RK4 and TFV4A) of convective terms
** explicit and implicit diffusion and source terms
* Stabilization: Cook & Cabot 4th-order artificial viscosity
* Linear solvers:
** PCG
** BICGSTAB, BICGSTAB2, BICGSTAB(2)
** Deflated PCG
** Deflated BICGSTAB(2)
** Residual recycling

== Data Structures ==
* 1D, 2D, 3D unstructured solver
* Full dual decomposition based on METIS
* Data registration (int, real, char, node, elem, face, pair, scalar, vector, tensor)
* Optimized non-blocking MPI communications
* Parallel load balancing
* Automatic reconnection of periodic boundaries
* Automatic homogeneous mesh refinement
* IO formats: Gambit (Fluent), Ensight, prepartionned HDF5 (XDMF) with compression
* Cartesian mesh generator
* Partitioned mesh support for HDF5 independent of the number of processors
* Parallel interpolator for partitioned HDF5 meshes
* Automatic sponge layers
* Built-in Gaussian filters of arbitrary size

== Software engineering ==
* 185,000 lines of code
* Object-oriented fortran with modules (f90)
* Version management with GIT
* Inline documentation in the source code (XML + Latex)
* GUI with client/server mode (wxwidgets, C++)
* Automatic validation tests (AQAT, AVVT)
* Automatic dependency of f90 modules in makefiles
* Keyword-based input file
* Easy profiling with timers

== Gallery ==
Some computation examples are given in the [[YALES2_Gallery:Bio-mechanics from I3M lab in Montpellier|gallery]].

== Performances ==
Thanks to highly efficient linear solvers, the speed-up of YALES2 is almost linear for meshes with several billion elements. These measures up to 21 billion elements were performed at IDRIS in France and at the Juelich Supercomputing Center in Germany.

[[File:YALES2 2010 Scale up.png|left|thumb|600px|YALES2 scale-up on Blue Gene/P machines]]

YALES2BIO

2013-02-12T08:28:48Z

Mendez:

{{#customtitle:YALES2BIO public page|YALES2BIO public page - www.coria-cfd.fr}}
== Motivation ==

YALES2BIO aims at the solving of the equations of fluid dynamics in the context of biological flows. The main application is cardiovoscular flows, involving microscale (at the level of cells) and macro-scale applications (blood flow in the heart).

YALES2BIO was developed from 2010 to 2013 by [[User:Mendez|S. Mendez]] and [[User:Chnafa|C. Chnafa]] and is maintained since 2012 by [[User:Mendez|S. Mendez]]at I3M, together with the YALES2 devbelopers at CORIA.

== Solvers ==

YALES2BIO is based on YALES2. In addition to the solvers implemented in YALES2, YALES2BIO has several specific solvers.
* Red blood cell solver ('''RBC''')
* Electrostatics solver ('''ESS''')
* ALE solver, with specific routines for heart ('''ALE''')

All the following features are inherited from the YALES2 kernel:

== Models ==
* Turbulence (Large-Eddy Simulation)
** Constant Smagorinsky
** Localized dynamic Smagorinsky
** WALE
** SIGMA

== Numerics ==
* Spatial: 2nd- and 4th-order finite-volume schemes
* Temporal:
** 4th-order explicit time integration (RK4 and TFV4A) of convective terms
** explicit and implicit diffusion and source terms
* Stabilization: Cook & Cabot 4th-order artificial viscosity
* Linear solvers:
** PCG
** BICGSTAB, BICGSTAB2, BICGSTAB(2)
** Deflated PCG
** Deflated BICGSTAB(2)
** Residual recycling

== Data Structures ==
* 1D, 2D, 3D unstructured solver
* Full dual decomposition based on METIS
* Data registration (int, real, char, node, elem, face, pair, scalar, vector, tensor)
* Optimized non-blocking MPI communications
* Parallel load balancing
* Automatic reconnection of periodic boundaries
* Automatic homogeneous mesh refinement
* IO formats: Gambit (Fluent), Ensight, prepartionned HDF5 (XDMF) with compression
* Cartesian mesh generator
* Partitioned mesh support for HDF5 independent of the number of processors
* Parallel interpolator for partitioned HDF5 meshes
* Automatic sponge layers
* Built-in Gaussian filters of arbitrary size

== Software engineering ==
* 185,000 lines of code
* Object-oriented fortran with modules (f90)
* Version management with GIT
* Inline documentation in the source code (XML + Latex)
* GUI with client/server mode (wxwidgets, C++)
* Automatic validation tests (AQAT, AVVT)
* Automatic dependency of f90 modules in makefiles
* Keyword-based input file
* Easy profiling with timers

== Gallery ==
Some computation examples are given in the [[YALES2_Gallery|gallery]].

== Performances ==
Thanks to highly efficient linear solvers, the speed-up of YALES2 is almost linear for meshes with several billion elements. These measures up to 21 billion elements were performed at IDRIS in France and at the Juelich Supercomputing Center in Germany.

[[File:YALES2 2010 Scale up.png|left|thumb|600px|YALES2 scale-up on Blue Gene/P machines]]

YALES2BIO

2013-02-12T08:28:25Z

Mendez: Created page with "{{#customtitle:YALES2 public page|YALES2 public page - www.coria-cfd.fr}} == Motivation == YALES2BIO aims at the solving of the equations of fluid dynamics in the context of bio..."

{{#customtitle:YALES2 public page|YALES2 public page - www.coria-cfd.fr}}
== Motivation ==

YALES2BIO aims at the solving of the equations of fluid dynamics in the context of biological flows. The main application is cardiovoscular flows, involving microscale (at the level of cells) and macro-scale applications (blood flow in the heart).

YALES2BIO was developed from 2010 to 2013 by [[User:Mendez|S. Mendez]] and [[User:Chnafa|C. Chnafa]] and is maintained since 2012 by [[User:Mendez|S. Mendez]]at I3M, together with the YALES2 devbelopers at CORIA.

== Solvers ==

YALES2BIO is based on YALES2. In addition to the solvers implemented in YALES2, YALES2BIO has several specific solvers.
* Red blood cell solver ('''RBC''')
* Electrostatics solver ('''ESS''')
* ALE solver, with specific routines for heart ('''ALE''')

All the following features are inherited from the YALES2 kernel:

== Models ==
* Turbulence (Large-Eddy Simulation)
** Constant Smagorinsky
** Localized dynamic Smagorinsky
** WALE
** SIGMA

== Numerics ==
* Spatial: 2nd- and 4th-order finite-volume schemes
* Temporal:
** 4th-order explicit time integration (RK4 and TFV4A) of convective terms
** explicit and implicit diffusion and source terms
* Stabilization: Cook & Cabot 4th-order artificial viscosity
* Linear solvers:
** PCG
** BICGSTAB, BICGSTAB2, BICGSTAB(2)
** Deflated PCG
** Deflated BICGSTAB(2)
** Residual recycling

== Data Structures ==
* 1D, 2D, 3D unstructured solver
* Full dual decomposition based on METIS
* Data registration (int, real, char, node, elem, face, pair, scalar, vector, tensor)
* Optimized non-blocking MPI communications
* Parallel load balancing
* Automatic reconnection of periodic boundaries
* Automatic homogeneous mesh refinement
* IO formats: Gambit (Fluent), Ensight, prepartionned HDF5 (XDMF) with compression
* Cartesian mesh generator
* Partitioned mesh support for HDF5 independent of the number of processors
* Parallel interpolator for partitioned HDF5 meshes
* Automatic sponge layers
* Built-in Gaussian filters of arbitrary size

== Software engineering ==
* 185,000 lines of code
* Object-oriented fortran with modules (f90)
* Version management with GIT
* Inline documentation in the source code (XML + Latex)
* GUI with client/server mode (wxwidgets, C++)
* Automatic validation tests (AQAT, AVVT)
* Automatic dependency of f90 modules in makefiles
* Keyword-based input file
* Easy profiling with timers

== Gallery ==
Some computation examples are given in the [[YALES2_Gallery|gallery]].

== Performances ==
Thanks to highly efficient linear solvers, the speed-up of YALES2 is almost linear for meshes with several billion elements. These measures up to 21 billion elements were performed at IDRIS in France and at the Juelich Supercomputing Center in Germany.

[[File:YALES2 2010 Scale up.png|left|thumb|600px|YALES2 scale-up on Blue Gene/P machines]]

User

2012-06-21T07:19:19Z

Mendez: /* Labs */

{{#customtitle:Users and partners|Users and partners - www.coria-cfd.fr}}
__NOTOC__

== Users of the YALES2 code ==

{| border="1" cellpadding="20" style="border-collapse: collapse; border-style: solid"
| style="vertical-align:top;"|
=== From CORIA ===

==== Staff ====
* [[User:Moureauv|Vincent Moureau]]
* [[User:Lartigue|Ghislain Lartigue]]
* [[User:Taieb|David Taieb]]
* [[User:Vervisch|Luc Vervisch]]
* [[User:Domingo|Pascale Domingo]]
* [[User:Ribert|Guillaume Ribert]]
* [[User:Dangelo|Yves D'Angelo]]

==== PhDs and Postdocs ====
* [[User:Gruselle|Catherine Gruselle]]
* [[User:Maheu|Nicolas Maheu]]
* [[User:Malandain|Mathias Malandain]]
* [[User:Nambully|Suresh Nambully]]
* [[User:Pecquery|François Pecquery]]
* [[User:Sjostrand|Marianne Sjostrand]]
* [[User:Vahe|Jonathan Vahe]]
* [[User:Guedot|Lola Guédot]]
* [[User:Jha|Pradeep Jha]]
| style="vertical-align:top;"|
=== From LEGI ===
==== Staff ====
* [http://www.legi.grenoble-inp.fr/web/spip.php?auteur57 Guillaume Balarac]
* [http://www.legi.grenoble-inp.fr/web/spip.php?auteur69 Christophe Corre]
* Patrick Begou

==== PhDs ====
* Nicolas Odier

=== From I3M ===
==== Staff ====
* Vanessa Lleras
* [[User:Mendez|Simon Mendez]]
* [http://www.math.univ-montp2.fr/~nicoud Franck Nicoud]

==== PhDs and Postdocs====
* [[User:Chnafa|Christophe Chnafa]]
* [http://www.fisica.unige.it/~martins/ Marco Martins Afonso]

==== Students ====
* [[User:Gibaud|Etienne Gibaud]]
| style="vertical-align:top;"|
=== From EM2C ===
==== Staff ====
* Denis Veynante
* Olivier Gicquel
* Benoit Fiorina
* Nasser Darabiha
* Matthieu Boileau
* Ronan Vicquelin

==== PhDs and postdocs ====
* [[User:mercier|Renaud Mercier]]
* [[User:yufang|Yufang Zhang]]
* Benedetta Franzelli

=== From IMFT ===
==== Staff ====
* [http://www.cerfacs.fr/~poinsot Thierry Poinsot]
| style="vertical-align:top;"|
=== From CERFACS ===
==== Staff ====
* [http://www.cerfacs.fr/~jjouhaud Jean-Christophe Jouhaud]
* Gabriel Staffelbach
* Olivier Vermorel
* Eléonore Riber
* Antoine Dauptain
* Florent Duchaine
* [http://www.cerfacs.fr/~poinsot Thierry Poinsot]
* Bénédicte Cuénot
* Guillaume Puigt
* Marc Montagnac

==== PhDs and Postdocs ====
* Matthias Kraushar
* Damien Poitou
* Emmanuel Motheau
* Victor Granet
* Guillaume Frichet
* Pierre Quillatre
* Geoffroy Chaussonnet
* Mario Falese
* [[User:wang|Gaofeng Wang]]
| style="vertical-align:top;"|
=== From ULB ===
==== Staff ====
* [http://www.ulb.ac.be/rech/inventaire/chercheurs/5/CH5075.html Bernard Knaepen]

==== Students ====
* Jihane Elyahyioui

=== From IFP-EN ===
==== Staff ====
* Christian Angelberger
* Olivier Colin
* Julien Bohbot
* Benjamin Reveille

=== From Sherbrooke ===
==== Staff ====
* [http://www.usherbrooke.ca/gmecanique/departement/personnel/professeurs/stephane-moreau Stéphane Moreau]
* Marlène SanJosé
|}

== Users of the SiTComB code ==

=== From CORIA ===
{| border="1" cellpadding="20" style="border-collapse: collapse; border-style: solid"
| style="vertical-align:top;"|
==== Staff ====
* [[User:Domingo|Pascale Domingo]]
* [[User:Lartigue|Ghislain Lartigue]]
* [[User:Ribert|Guillaume Ribert]]
* [[User:Vervisch|Luc Vervisch]]

| style="vertical-align:top;"|
==== PhDs and Postdocs ====
* [[User:Lodier|Guillaume Lodier]]
* [[User:Lisab|Lisa Bouheraoua]]
* [[User:Merlin|Cindy Merlin]]
* [[User:Nambully|Suresh Nambully]]
* [[User:Petit|Xavier Petit]]
|}

== Industrial Partners ==

* [http://safran-group.com SAFRAN]
* [http://www.renault.com Renault]
* [http://www.psa-peugeot-citroen.com PSA]
* [http://www.rhodia.com Rhodia]
* [http://www.airliquide.com Air Liquide]
* [http://www.saint-gobain.fr Saint-Gobain]

== Labs ==

{| cellpadding="20"
| style="vertical-align:top;"|
* [http://www.cnrs.fr CNRS]
* [http://www.coria.fr CORIA]
* [http://www.insa-rouen.fr INSA de Rouen]
* [http://www.em2c.ecp.fr EM2C]
* [http://www.cerfacs.fr CERFACS]
| style="vertical-align:top;"|
* [http://www.ifpenergiesnouvelles.fr IFP Energies Nouvelles]
* [http://www.imft.fr IMFT]
* [http://www.legi.grenoble-inp.fr LEGI]
* [http://www.ulb.ac.be ULB]
* [http://www.math.univ-montp2.fr I3M]
|}

== Computing Centers ==

* [http://www.genci.fr GENCI]
* [http://www.idris.fr IDRIS]
* [http://www.cines.fr CINES]
* [http://www.crihan.fr CRIHAN]
* [http://www.fz-juelich.de/jsc/en Jülich Computing Center]

User

2012-06-21T07:17:18Z

Mendez: /* PhDs */

{{#customtitle:Users and partners|Users and partners - www.coria-cfd.fr}}
__NOTOC__

== Users of the YALES2 code ==

{| border="1" cellpadding="20" style="border-collapse: collapse; border-style: solid"
| style="vertical-align:top;"|
=== From CORIA ===

==== Staff ====
* [[User:Moureauv|Vincent Moureau]]
* [[User:Lartigue|Ghislain Lartigue]]
* [[User:Taieb|David Taieb]]
* [[User:Vervisch|Luc Vervisch]]
* [[User:Domingo|Pascale Domingo]]
* [[User:Ribert|Guillaume Ribert]]
* [[User:Dangelo|Yves D'Angelo]]

==== PhDs and Postdocs ====
* [[User:Gruselle|Catherine Gruselle]]
* [[User:Maheu|Nicolas Maheu]]
* [[User:Malandain|Mathias Malandain]]
* [[User:Nambully|Suresh Nambully]]
* [[User:Pecquery|François Pecquery]]
* [[User:Sjostrand|Marianne Sjostrand]]
* [[User:Vahe|Jonathan Vahe]]
* [[User:Guedot|Lola Guédot]]
* [[User:Jha|Pradeep Jha]]
| style="vertical-align:top;"|
=== From LEGI ===
==== Staff ====
* [http://www.legi.grenoble-inp.fr/web/spip.php?auteur57 Guillaume Balarac]
* [http://www.legi.grenoble-inp.fr/web/spip.php?auteur69 Christophe Corre]
* Patrick Begou

==== PhDs ====
* Nicolas Odier

=== From I3M ===
==== Staff ====
* Vanessa Lleras
* [[User:Mendez|Simon Mendez]]
* [http://www.math.univ-montp2.fr/~nicoud Franck Nicoud]

==== PhDs and Postdocs====
* [[User:Chnafa|Christophe Chnafa]]
* [http://www.fisica.unige.it/~martins/ Marco Martins Afonso]

==== Students ====
* [[User:Gibaud|Etienne Gibaud]]
| style="vertical-align:top;"|
=== From EM2C ===
==== Staff ====
* Denis Veynante
* Olivier Gicquel
* Benoit Fiorina
* Nasser Darabiha
* Matthieu Boileau
* Ronan Vicquelin

==== PhDs and postdocs ====
* [[User:mercier|Renaud Mercier]]
* [[User:yufang|Yufang Zhang]]
* Benedetta Franzelli

=== From IMFT ===
==== Staff ====
* [http://www.cerfacs.fr/~poinsot Thierry Poinsot]
| style="vertical-align:top;"|
=== From CERFACS ===
==== Staff ====
* [http://www.cerfacs.fr/~jjouhaud Jean-Christophe Jouhaud]
* Gabriel Staffelbach
* Olivier Vermorel
* Eléonore Riber
* Antoine Dauptain
* Florent Duchaine
* [http://www.cerfacs.fr/~poinsot Thierry Poinsot]
* Bénédicte Cuénot
* Guillaume Puigt
* Marc Montagnac

==== PhDs and Postdocs ====
* Matthias Kraushar
* Damien Poitou
* Emmanuel Motheau
* Victor Granet
* Guillaume Frichet
* Pierre Quillatre
* Geoffroy Chaussonnet
* Mario Falese
* [[User:wang|Gaofeng Wang]]
| style="vertical-align:top;"|
=== From ULB ===
==== Staff ====
* [http://www.ulb.ac.be/rech/inventaire/chercheurs/5/CH5075.html Bernard Knaepen]

==== Students ====
* Jihane Elyahyioui

=== From IFP-EN ===
==== Staff ====
* Christian Angelberger
* Olivier Colin
* Julien Bohbot
* Benjamin Reveille

=== From Sherbrooke ===
==== Staff ====
* [http://www.usherbrooke.ca/gmecanique/departement/personnel/professeurs/stephane-moreau Stéphane Moreau]
* Marlène SanJosé
|}

== Users of the SiTComB code ==

=== From CORIA ===
{| border="1" cellpadding="20" style="border-collapse: collapse; border-style: solid"
| style="vertical-align:top;"|
==== Staff ====
* [[User:Domingo|Pascale Domingo]]
* [[User:Lartigue|Ghislain Lartigue]]
* [[User:Ribert|Guillaume Ribert]]
* [[User:Vervisch|Luc Vervisch]]

| style="vertical-align:top;"|
==== PhDs and Postdocs ====
* [[User:Lodier|Guillaume Lodier]]
* [[User:Lisab|Lisa Bouheraoua]]
* [[User:Merlin|Cindy Merlin]]
* [[User:Nambully|Suresh Nambully]]
* [[User:Petit|Xavier Petit]]
|}

== Industrial Partners ==

* [http://safran-group.com SAFRAN]
* [http://www.renault.com Renault]
* [http://www.psa-peugeot-citroen.com PSA]
* [http://www.rhodia.com Rhodia]
* [http://www.airliquide.com Air Liquide]
* [http://www.saint-gobain.fr Saint-Gobain]

== Labs ==

{| cellpadding="20"
| style="vertical-align:top;"|
* [http://www.cnrs.fr CNRS]
* [http://www.coria.fr CORIA]
* [http://www.insa-rouen.fr INSA de Rouen]
* [http://www.em2c.ecp.fr EM2C]
* [http://www.cerfacs.fr CERFACS]
| style="vertical-align:top;"|
* [http://www.ifpenergiesnouvelles.fr IFP Energies Nouvelles]
* [http://www.imft.fr IMFT]
* [http://www.legi.grenoble-inp.fr LEGI]
* [http://www.ulb.ac.be ULB]
* [http://www.math.univ-montp2.fr/SPIP/I3M-UMR-5149e I3M]
|}

== Computing Centers ==

* [http://www.genci.fr GENCI]
* [http://www.idris.fr IDRIS]
* [http://www.cines.fr CINES]
* [http://www.crihan.fr CRIHAN]
* [http://www.fz-juelich.de/jsc/en Jülich Computing Center]

User:Mendez

2011-02-03T14:59:06Z

Mendez:

Welcome on {{BASEPAGENAME}}'s user page.

== Personal Information ==

[[File:PhotoSimonMendez.jpg|right|thumb|Simon Mendez]]

Simon Mendez 
CNRS - Research fellow @ I3M

Office: I3M/B. 9, room 418 
email: smendez@math.univ-montp2.fr 
Tel: +33 (0)4 67 14 35 80

== Personal Webpage ==

http://www.math.univ-montp2.fr/~mendez/index.html

== Lab Address ==
I3M 
UMR CNRS 5149. CC 051 
Universite Montpellier II 
Place Eugene Bataillon 
34095 Montpellier 
Tel: +33 (0)4 67 14 35 57 
Fax: +33 (0)4 67 14 35 58

== Research Activities ==

* Red blood cell modeling
* Blood Flows
* Large-Eddy Simulation in complex geometries
* Computational Fluid Dynamics
* Supersonic jet noise

== YALES2 Activities ==

* Level-set method for simulations of red blood cells
* ALE methods for cardiovascular flows
* Unsteady low-Reynolds number flows for cardiovascular applications
* Boundary conditions

== Teaching Activities ==

* Mathematical methods for engineers at Polytech'Montpellier
* Data Processing at Polytech'Montpellier

== Background ==

* 2008-2009: post-doctoral fellowship at the Center for Turbulence Research, Stanford University, CA, USA on LES for supersonic jet noise.
* 2007-2008: post-doctoral fellowship at CERFACS, France, on acoustics of perforated plates.
* 2004-2007: Ph.D. focused on Large-Eddy Simulation of the flow around perforated plates, CERFACS, France.
* 2003-2004: M.S. of Fluid Dynamics, INP Toulouse, France.
* 2001-2004: B.S. of Fluid Mechanics and Hydraulics, ENSEEIHT Toulouse, France.

== Reviewing activities ==
Reviewer for International Journal of Numerical Methods in Fluids, Combustion and Flame.

== Publications ==

* Jaegle, F., Cabrit, O., Mendez, S. and Poinsot, T., "Implementation methods of wall functions in cell-vertex numerical solvers", ''Flow, Turbulence and Combustion'', '''2010''', 85(2), 245-272.

* Mendez, S. and Eldredge, J. D., "Acoustic modeling of perforated plates with bias flow for Large-Eddy Simulations", ''Journal of Computational Physics'', '''2009''', 228(13), 4757-4772.

* Gullaud, E., Mendez, S., Sensiau, C. Nicoud, F. and Poinsot T., "Effect of multiperforated plates on the acoustic modes in combustors", ''Comptes Rendus de l'Académie des sciences, Mécanique'', '''2009''', 337(6-7), 550-561.

* Duchaine, F., Mendez, S., Nicoud, F., Corpron, A., Moureau, V. and Poinsot T., "Conjugate Heat Transfer with Large Eddy Simulation for Gas Turbine Components", ''Comptes Rendus de l'Académie des sciences'', '''2009''', Mécanique, 337(6-7), 406-414.

* Mendez, S. and Nicoud F., "Adiabatic Homogeneous Model for Flow Around a Multiperforated Plate", ''AIAA Journal'', '''2008''', 46(10), 2623-2633.

* Senoner, J.-M., Garcia, M., Mendez, S., Staffelbach, G., Vermorel, O. and Poinsot, T., "Growth of rounding errors and the repetitivity of Large Eddy Simulations", ''AIAA Journal'', '''2008''', 46(7), 1773-1781.

* Mendez, S. and Nicoud F., "Large-eddy simulation of a bi-periodic turbulent flow with effusion", '''2008''', ''Journal of Fluid Mechanics'', 598, 27-65.

File:PhotoSimonMendez.jpg

2011-02-03T09:07:39Z

Mendez:

User

2011-02-03T09:07:11Z

Mendez: /* From I3M */

== Industrial Partners ==

* [http://safran-group.com SAFRAN]
* [http://www.renault.com Renault]
* [http://www.psa-peugeot-citroen.com PSA]
* [http://www.rhodia.com Rhodia]
* [http://www.airliquide.com Air Liquide]
* [http://www.saint-gobain.fr Saint-Gobain]
* [http://www.ifpenergiesnouvelles.fr IFP Energies Nouvelles]

== Labs ==

* [http://www.cnrs.fr CNRS]
* [http://www.coria.fr CORIA]
* [http://www.insa-rouen.fr INSA de Rouen]
* [http://www.em2c.ecp.fr EM2C]
* [http://www.cerfacs.fr CERFACS]
* [http://www.imft.fr IMFT]
* [http://www.legi.grenoble-inp.fr LEGI]
* [http://www.ulb.ac.be ULB]
* [http://www.math.univ-montp2.fr/SPIP/I3M-UMR-5149e I3M]

== People ==

=== From CORIA ===
* [[User:Moureauv|Vincent Moureau]]
* [[User:Lartigue|Ghislain Lartigue]]
* [http://www.coria.fr/spip.php?auteur44 Luc Vervisch]
* [http://www.coria.fr/spip.php?auteur75 Guillaume Ribert]
* [http://www.coria.fr/spip.php?auteur48 Pascale Domingo]
* David Taieb
* Nicolas Enjalbert
* Danh N'Guyen
* François Pecquery
* Suresh Nambully
* Guillaume Lodier
* Mathias Malandain
* Xavier Petit
* Jonathan Vahe
* Nicolas Maheu
* Catherine Gruselle
* Marianne Sjostrand

=== From ULB ===
* Stijn Vantieghem
* Bernard Knaepen

=== From LEGI ===
* Guilaume Balarac

=== From I3M ===
* Franck Nicoud
* [[User:Mendez|Simon Mendez]]

=== From IMFT ===

=== From EM2C ===
* Denis Veynante

=== From CERFACS ===
* Thierry Poinsot
* Matthias Kraushar
* Gabriel Staffelbach
* Olivier Vermorel
* Jean-Christophe Jouhaud

=== From Sherbrooke ===

User:Mendez

2011-02-03T09:05:01Z

Mendez: /* Research Activities */

Welcome on {{BASEPAGENAME}}'s user page.

== Personal Information ==

[[File:PhotoSimonMendez.jpg|right|thumb|Simon Mendez]]

Simon Mendez 
CNRS - Research fellow @ I3M

Office: I3M/B. 9, room 418 
email: smendez@math.univ-montp2.fr 
Tel: +33 (0)4 67 14 35 80

== Personal Webpage ==

http://www.math.univ-montp2.fr/~mendez/index.html

== Lab Address ==
I3M 
UMR CNRS 5149. CC 051 
Universite Montpellier II 
Place Eugene Bataillon 
34095 Montpellier 
Tel: +33 (0)4 67 14 35 57 
Fax: +33 (0)4 67 14 35 58

== Research Activities ==

* Red blood cell modeling
* Blood Flows
* Large-Eddy Simulation in complex geometries
* Computational Fluid Dynamics
* Supersonic jet noise

== Teaching Activities ==

* Mathematical methods for engineers at Polytech'Montpellier
* Data Processing at Polytech'Montpellier

== Background ==

* 2008-2009: post-doctoral fellowship at the Center for Turbulence Research, Stanford University, CA, USA on LES for supersonic jet noise.
* 2007-2008: post-doctoral fellowship at CERFACS, France, on acoustics of perforated plates.
* 2004-2007: Ph.D. focused on Large-Eddy Simulation of the flow around perforated plates, CERFACS, France.
* 2003-2004: M.S. of Fluid Dynamics, INP Toulouse, France.
* 2001-2004: B.S. of Fluid Mechanics and Hydraulics, ENSEEIHT Toulouse, France.

== Reviewing activities ==
Reviewer for International Journal of Numerical Methods in Fluids, Combustion and Flame.

== Publications ==

* Jaegle, F., Cabrit, O., Mendez, S. and Poinsot, T., "Implementation methods of wall functions in cell-vertex numerical solvers", ''Flow, Turbulence and Combustion'', '''2010''', 85(2), 245-272.

* Mendez, S. and Eldredge, J. D., "Acoustic modeling of perforated plates with bias flow for Large-Eddy Simulations", ''Journal of Computational Physics'', '''2009''', 228(13), 4757-4772.

* Gullaud, E., Mendez, S., Sensiau, C. Nicoud, F. and Poinsot T., "Effect of multiperforated plates on the acoustic modes in combustors", ''Comptes Rendus de l'Académie des sciences, Mécanique'', '''2009''', 337(6-7), 550-561.

* Duchaine, F., Mendez, S., Nicoud, F., Corpron, A., Moureau, V. and Poinsot T., "Conjugate Heat Transfer with Large Eddy Simulation for Gas Turbine Components", ''Comptes Rendus de l'Académie des sciences'', '''2009''', Mécanique, 337(6-7), 406-414.

* Mendez, S. and Nicoud F., "Adiabatic Homogeneous Model for Flow Around a Multiperforated Plate", ''AIAA Journal'', '''2008''', 46(10), 2623-2633.

* Senoner, J.-M., Garcia, M., Mendez, S., Staffelbach, G., Vermorel, O. and Poinsot, T., "Growth of rounding errors and the repetitivity of Large Eddy Simulations", ''AIAA Journal'', '''2008''', 46(7), 1773-1781.

* Mendez, S. and Nicoud F., "Large-eddy simulation of a bi-periodic turbulent flow with effusion", '''2008''', ''Journal of Fluid Mechanics'', 598, 27-65.

User:Mendez

2011-02-03T09:04:41Z

Mendez: /* Background */

Welcome on {{BASEPAGENAME}}'s user page.

== Personal Information ==

[[File:PhotoSimonMendez.jpg|right|thumb|Simon Mendez]]

Simon Mendez 
CNRS - Research fellow @ I3M

Office: I3M/B. 9, room 418 
email: smendez@math.univ-montp2.fr 
Tel: +33 (0)4 67 14 35 80

== Personal Webpage ==

http://www.math.univ-montp2.fr/~mendez/index.html

== Lab Address ==
I3M 
UMR CNRS 5149. CC 051 
Universite Montpellier II 
Place Eugene Bataillon 
34095 Montpellier 
Tel: +33 (0)4 67 14 35 57 
Fax: +33 (0)4 67 14 35 58

== Research Activities ==

* Red blood cell modeling
* Blood Flows
* Large-Eddy Simulation in complex geometries
* Computational Fluid Dynamics
* Supersonic jet noise

== Teaching Activities ==

* Mathematical methods for engineers at Polytech'Montpellier
* Data Processing at Polytech'Montpellier

== Background ==

* 2008-2009: post-doctoral fellowship at the Center for Turbulence Research, Stanford University, CA, USA on LES for supersonic jet noise.
* 2007-2008: post-doctoral fellowship at CERFACS, France, on acoustics of perforated plates.
* 2004-2007: Ph.D. focused on Large-Eddy Simulation of the flow around perforated plates, CERFACS, France.
* 2003-2004: M.S. of Fluid Dynamics, INP Toulouse, France.
* 2001-2004: B.S. of Fluid Mechanics and Hydraulics, ENSEEIHT Toulouse, France.

== Reviewing activities ==
Reviewer for International Journal of Numerical Methods in Fluids, Combustion and Flame.

== Publications ==

* Jaegle, F., Cabrit, O., Mendez, S. and Poinsot, T., "Implementation methods of wall functions in cell-vertex numerical solvers", ''Flow, Turbulence and Combustion'', '''2010''', 85(2), 245-272.

* Mendez, S. and Eldredge, J. D., "Acoustic modeling of perforated plates with bias flow for Large-Eddy Simulations", ''Journal of Computational Physics'', '''2009''', 228(13), 4757-4772.

* Gullaud, E., Mendez, S., Sensiau, C. Nicoud, F. and Poinsot T., "Effect of multiperforated plates on the acoustic modes in combustors", ''Comptes Rendus de l'Académie des sciences, Mécanique'', '''2009''', 337(6-7), 550-561.

* Duchaine, F., Mendez, S., Nicoud, F., Corpron, A., Moureau, V. and Poinsot T., "Conjugate Heat Transfer with Large Eddy Simulation for Gas Turbine Components", ''Comptes Rendus de l'Académie des sciences'', '''2009''', Mécanique, 337(6-7), 406-414.

* Mendez, S. and Nicoud F., "Adiabatic Homogeneous Model for Flow Around a Multiperforated Plate", ''AIAA Journal'', '''2008''', 46(10), 2623-2633.

* Senoner, J.-M., Garcia, M., Mendez, S., Staffelbach, G., Vermorel, O. and Poinsot, T., "Growth of rounding errors and the repetitivity of Large Eddy Simulations", ''AIAA Journal'', '''2008''', 46(7), 1773-1781.

* Mendez, S. and Nicoud F., "Large-eddy simulation of a bi-periodic turbulent flow with effusion", '''2008''', ''Journal of Fluid Mechanics'', 598, 27-65.

User:Mendez

2011-02-03T09:04:02Z

Mendez: /* Personal Webpage */

Welcome on {{BASEPAGENAME}}'s user page.

== Personal Information ==

[[File:PhotoSimonMendez.jpg|right|thumb|Simon Mendez]]

Simon Mendez 
CNRS - Research fellow @ I3M

Office: I3M/B. 9, room 418 
email: smendez@math.univ-montp2.fr 
Tel: +33 (0)4 67 14 35 80

== Personal Webpage ==

http://www.math.univ-montp2.fr/~mendez/index.html

== Lab Address ==
I3M 
UMR CNRS 5149. CC 051 
Universite Montpellier II 
Place Eugene Bataillon 
34095 Montpellier 
Tel: +33 (0)4 67 14 35 57 
Fax: +33 (0)4 67 14 35 58

== Research Activities ==

* Red blood cell modeling
* Blood Flows
* Large-Eddy Simulation in complex geometries
* Computational Fluid Dynamics
* Supersonic jet noise

== Teaching Activities ==

* Mathematical methods for engineers at Polytech'Montpellier
* Data Processing at Polytech'Montpellier

== Background ==

* 2008-2009: post-doctoral fellowship at the Center for Turbulence Research, Stanford University, CA, USA on LES for supersonic jet noise.
* 2007-2008: post-doctoral fellowship at CERFACS, France, on acoustics of perforated plates.
* 2004-2007: Ph.D. focused on Large-Eddy Simulation of the flow around perforated plates, CERFACS, France.
* 2003-2004: M.S. of Fluid Dynamics, INP Toulouse, France.
* 1998-2001: B.S. of Fluid Mechanics and Hydraulics, ENSEEIHT Toulouse, France.

== Reviewing activities ==
Reviewer for International Journal of Numerical Methods in Fluids, Combustion and Flame.

== Publications ==

* Jaegle, F., Cabrit, O., Mendez, S. and Poinsot, T., "Implementation methods of wall functions in cell-vertex numerical solvers", ''Flow, Turbulence and Combustion'', '''2010''', 85(2), 245-272.

* Mendez, S. and Eldredge, J. D., "Acoustic modeling of perforated plates with bias flow for Large-Eddy Simulations", ''Journal of Computational Physics'', '''2009''', 228(13), 4757-4772.

* Gullaud, E., Mendez, S., Sensiau, C. Nicoud, F. and Poinsot T., "Effect of multiperforated plates on the acoustic modes in combustors", ''Comptes Rendus de l'Académie des sciences, Mécanique'', '''2009''', 337(6-7), 550-561.

* Duchaine, F., Mendez, S., Nicoud, F., Corpron, A., Moureau, V. and Poinsot T., "Conjugate Heat Transfer with Large Eddy Simulation for Gas Turbine Components", ''Comptes Rendus de l'Académie des sciences'', '''2009''', Mécanique, 337(6-7), 406-414.

* Mendez, S. and Nicoud F., "Adiabatic Homogeneous Model for Flow Around a Multiperforated Plate", ''AIAA Journal'', '''2008''', 46(10), 2623-2633.

* Senoner, J.-M., Garcia, M., Mendez, S., Staffelbach, G., Vermorel, O. and Poinsot, T., "Growth of rounding errors and the repetitivity of Large Eddy Simulations", ''AIAA Journal'', '''2008''', 46(7), 1773-1781.

* Mendez, S. and Nicoud F., "Large-eddy simulation of a bi-periodic turbulent flow with effusion", '''2008''', ''Journal of Fluid Mechanics'', 598, 27-65.

User:Mendez

2011-02-03T09:02:52Z

Mendez:

Welcome on {{BASEPAGENAME}}'s user page.

== Personal Information ==

[[File:PhotoSimonMendez.jpg|right|thumb|Simon Mendez]]

Simon Mendez 
CNRS - Research fellow @ I3M

Office: I3M/B. 9, room 418 
email: smendez@math.univ-montp2.fr 
Tel: +33 (0)4 67 14 35 80

== Personal Webpage ==

<a href="http://www.math.univ-montp2.fr/~mendez/index.html">here</a>

== Lab Address ==
I3M 
UMR CNRS 5149. CC 051 
Universite Montpellier II 
Place Eugene Bataillon 
34095 Montpellier 
Tel: +33 (0)4 67 14 35 57 
Fax: +33 (0)4 67 14 35 58

== Research Activities ==

* Red blood cell modeling
* Blood Flows
* Large-Eddy Simulation in complex geometries
* Computational Fluid Dynamics
* Supersonic jet noise

== Teaching Activities ==

* Mathematical methods for engineers at Polytech'Montpellier
* Data Processing at Polytech'Montpellier

== Background ==

* 2008-2009: post-doctoral fellowship at the Center for Turbulence Research, Stanford University, CA, USA on LES for supersonic jet noise.
* 2007-2008: post-doctoral fellowship at CERFACS, France, on acoustics of perforated plates.
* 2004-2007: Ph.D. focused on Large-Eddy Simulation of the flow around perforated plates, CERFACS, France.
* 2003-2004: M.S. of Fluid Dynamics, INP Toulouse, France.
* 1998-2001: B.S. of Fluid Mechanics and Hydraulics, ENSEEIHT Toulouse, France.

== Reviewing activities ==
Reviewer for International Journal of Numerical Methods in Fluids, Combustion and Flame.

== Publications ==

* Jaegle, F., Cabrit, O., Mendez, S. and Poinsot, T., "Implementation methods of wall functions in cell-vertex numerical solvers", ''Flow, Turbulence and Combustion'', '''2010''', 85(2), 245-272.

* Mendez, S. and Eldredge, J. D., "Acoustic modeling of perforated plates with bias flow for Large-Eddy Simulations", ''Journal of Computational Physics'', '''2009''', 228(13), 4757-4772.

* Gullaud, E., Mendez, S., Sensiau, C. Nicoud, F. and Poinsot T., "Effect of multiperforated plates on the acoustic modes in combustors", ''Comptes Rendus de l'Académie des sciences, Mécanique'', '''2009''', 337(6-7), 550-561.

* Duchaine, F., Mendez, S., Nicoud, F., Corpron, A., Moureau, V. and Poinsot T., "Conjugate Heat Transfer with Large Eddy Simulation for Gas Turbine Components", ''Comptes Rendus de l'Académie des sciences'', '''2009''', Mécanique, 337(6-7), 406-414.

* Mendez, S. and Nicoud F., "Adiabatic Homogeneous Model for Flow Around a Multiperforated Plate", ''AIAA Journal'', '''2008''', 46(10), 2623-2633.

* Senoner, J.-M., Garcia, M., Mendez, S., Staffelbach, G., Vermorel, O. and Poinsot, T., "Growth of rounding errors and the repetitivity of Large Eddy Simulations", ''AIAA Journal'', '''2008''', 46(7), 1773-1781.

* Mendez, S. and Nicoud F., "Large-eddy simulation of a bi-periodic turbulent flow with effusion", '''2008''', ''Journal of Fluid Mechanics'', 598, 27-65.